Small | Plant Energy Biology

Centre Publications for Ian Small

last updated: Mon Nov 2 14:54:32 2009

31. Okuda K, Hammani K, Tanz, S, Peng L, Fukao Y, Myouga F, Motohashi R, Shinozaki K, Small I and Shikanai T (2009) The pentatricopeptide repeat protein OTP82 is required for RNA editing of plastid ndhB and ndhG transcripts The Plant Journal (in press) PUBMED Impact Factor: 6.5

30. Hammani K, Okuda K, Tanz SK, Chateigner-Boutin AL, Shikanai T and Small I (2009) A study of new Arabidopsis chloroplast RNA editing mutants reveals general features of editing factors and their target sites Plant Cell Plant Cell (in press) PUBMED Impact Factor: 11

29. Meyer EH, Tomaz T, Carroll AJ, Estavillo G, Delannoy E, Tanz S, Small ID, Pogson BJ, and Millar AH (2009) Remodeled respiration in ndusf4 with low phosphorylation efficiency suppresses Arabidopsis germination and growth and alters control of metabolism at night Plant Physiology Oct;151(2):603-19. PUBMED Impact Factor: 6

28. Kühn K, Richter U, Meyer EH, Delannoy E, Falcon de Longevialle A, O'Toole N, Börner T, Millar AH, Small ID and Whelan J (2009) Phage-Type RNA Polymerase RPOTmp Performs Gene-Specific Transcription in Mitochondria of Arabidopsis thaliana Plant Cell Sep;21(9):2762-79 PUBMED Impact Factor: 11

27. Kumari M, Clarke HJ, Small I and Siddique KHM (2009) Albinism in plants: a major bottleneck in wide hybridization, androgenesis and doubled haploid culture Critical Reviews in Plant Sciences (in press) PUBMED Impact Factor: 3

26. Delannoy E, Le Ret M, Faivre-Nitschke E, Estavillo G, Bergdoll M, Taylor NL, Pogson B, Small I, Imbault P and Gualberto JM (2009) Arabidopsis tRNA adenosine deaminase (TADA) is responsible for editing the wobble nucleotide of chloroplast tRNAArg(ACG), a modification essential for efficient chloroplast translation Plant Cell 21(7):2058-71 PUBMED Impact Factor: 11

25. Tillich M, Hardel SL, Kupsch C, Armbruster U, Delannoy E, Gualberto J, Leister D, Small I and Schmitz-Linneweber C Apr. 2009 Chloroplast ribonucleoprotein CP31A is required for editing and stability of specific chloroplast mRNAs Proceedings of the National Academy of Sciences USA 106(14):6002-7 PUBMED Impact Factor: 10

24. Okuda K, Chateigner-Boutin AL, Nakamura T, Delannoy E, Sugita M, Myougaf F, Motohashi R, Shinozaki K, Small I and Shikanai T Jan 2009 Pentatricopeptide repeat proteins with the DYW motif have distinct molecular functions in RNA editing and RNA cleavage in Arabidopsis chloroplasts Plant Cell 21(1):146-56 PUBMED Impact Factor: 11

23. Zhou W, Cheng Y, Yap A, Chateigner-Boutin AL, Delannoy E, Hammani K, Small I and Huang J (April 2009) The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth The Plant Journal 58(1):82-96 PUBMED Impact Factor: 7

22. Carrie C, Kühn K, Murcha M, Duncan O, Small I, O'Toole N and Whelan J 2009 Approaches to Defining Dual-Targeted Proteins in Arabidopsis The Plant Journal 57(6):1128-39 PUBMED Impact Factor: 7

21. Schmitz-Linneweber C and Small I 2008 Pentatricopeptide repeat proteins: a socket set for organelle gene expression Trends in Plant Science 13:663-70 PUBMED Impact Factor: 10

20. Eubel H, Meyer EH, Taylor NL, Bussell JD, O'Toole N, Heazlewood JL, Castleden I, Small ID, Smith SM and Millar AH. (October 17, 2008) Novel proteins, putative membrane transporters and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. Plant Physiology 148:1809-29 PUBMED Impact Factor: 6

19. Garmier M, Carroll AJ, Delannoy E, Vallet C, Day DA, Small ID and Millar AH (Nov, 2008) Complex I dysfunction redirects cellular and mitochondrial metabolism in Arabidopsis Plant Physiology 148(3):1324-1341 PUBMED Impact Factor: 6

18. Pogson BJ, Woo NS, Förster B and Small ID (Nov, 2008) Plastid signalling to the nucleus and beyond. Trends in Plant Science 13 (11): 602-609 PUBMED Impact Factor: 10

17. Chateigner-Boutin AL, Ramos-Vega M, Guevara-García A, Andrés C, de la Luz Gutiérrez-Nava M, Cantero A, Delannoy E, Jiménez LF, Lurin C, Small I and León P (Jul 23, 2008) CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts. The Plant Journal 56:590-602 PUBMED Impact Factor: 7

16. Falcon de Longevialle AF, Hendrickson L, Taylor NL, Delannoy E, Lurin C, Badger M, Millar AH and Small I (Oct, 2008) The pentatricopeptide repeat gene OTP51 with two LAGLIDADG motifs is required for the cis-splicing of plastid ycf3 intron 2 in Arabidopsis thaliana The Plant Journal 56(1):157-68 PUBMED Impact Factor: 7

15. O'Toole N, Hattori M, Andres C, Iida K, Lurin C, Schmitz-Linneweber C, Sugita M and Small I (June, 2008) On the expansion of the pentatricopeptide repeat gene family in plants. Molecular Biology and Evolution 25(6):1120-1128 PUBMED Impact Factor: 7

14. Narsai R, Howell KA, Millar AH, O'Toole N, Small I and Whelan J (2007) Genome-Wide Analysis of mRNA Decay Rates and their Determinants in Arabidopsis thaliana. The Plant Cell 19, 3418-3436 PUBMED Impact Factor: 11

13. Delannoy E, Stanley WA, Bond CS and Small ID (2007) Pentatricopeptide repeat (PPR) proteins as sequence-specificity factors in post-transcriptional processes in organelles. Biochemical Society Transactions 35, 1643-1647. PUBMED Impact Factor: 3

12. Falcon de Longevialle A, Meyer EH, Andrés C, Taylor NL, Lurin C, Millar AH and Small ID (2007). The Pentatricopeptide Repeat Gene OTP43 is Required for trans-Splicing of the Mitochondrial nad1 Intron 1 in Arabidopsis thaliana. The Plant Cell 19, 3256-3265 PUBMED Impact Factor: 11

11. Saloné V, Rãdinger M, Polsakiewicz M, Hoffmann B, Groth-Malonek M, Szurek B, Small I, Knoop V and Lurin C (2007). A hypothesis on the identification of the editing enzyme in plant organelles. FEBS Letters 581, 4132-8 PUBMED Impact Factor: 3

10. Chateigner-Boutin A-L and Small I (2007). A rapid high-throughput method for the detection and quantification of RNA editing based on high-resolution melting of amplicons. Nucleic Acids Research 35, e114 PUBMED Impact Factor: 8

9. Legen J., Wanner G., Herrmann R.G., Small I., and Schmitz-Linneweber C. (2007). Plastid tRNA Genes trnC-GCA and trnN-GUU are essential for plant cell development. The Plant Journal 51, 751-62 PUBMED Impact Factor: 7

8. Maliga P., and Small I. (2007). Plant biotechnology 2007: all three genomes make contributions to progress. Current Opinion in Biotechnology, 18, 97-99. DOI Abstract Impact Factor: 7

7. Pusnik M., Small I., Read L.K., Fabbro T., and Schneider A. (2007). Pentatricopeptide repeat proteins in T. brucei function in mitochondrial ribosomes. Molecular and Cellular Biology 27, 6876-88 PUBMED Impact Factor: 7

6. Small I. (2007). RNAi for revealing and engineering plant gene functions. Current Opinion in Biotechnology 18, 148-153. PUBMED Impact Factor: 7.

5. Heazlewood JL, Verboom RE, Tonti-Filippini J, Small I and Millar AH (2007) SUBA: The Arabidopsis Subcellular Database. Nucleic Acids Research 35, D213-8. PUBMED Impact Factor: 8

4. Andres C, Lurin C and Small ID (2007) The multifarious roles of PPR proteins in plant mitochondrial gene expression. Physiologia Plantarum 129, 14-22. Abstract Impact Factor: 2

3. Millar AH, Whelan J and Small I (2006) Recent surprises in protein targeting to mitochondria and plastids. Current Opinion in Plant Biology 9, 610-615 PUBMED Impact Factor: 11

2. Duchene AM, Giritch A, Hoffmann B, Cognat V, Lancelin D, Peeters NM, Zaepfel M, Marechal-Drouard L and Small ID (2005) Dual targeting is the rule for organellar aminoacyl-tRNA synthetases in Arabidopsis thaliana. Proceedings of the National Academy of Sciences USA. 102:16484-16489. PUBMED Impact Factor: 10

1. Aubourg S, Brunaud V, Bruyere C, Cock M, Cooke R, Cottet A, Couloux A, Dehais P, Deleage G, Duclert A, Echeverria M, Eschbach A, Falconet D, Filippi G, Gaspin C, Geourjon C, Grienenberger JM, Houlne G, Jamet E, Lechauve F, Leleu O, Leroy P, Mache R, Meyer C, Nedjari H, Negrutiu I, Orsini V, Peyretaillade E, Pommier C, Raes J, Risler JL, Riviere S, Rombauts S, Rouze P, Schneider M, Schwob P, Small I, Soumayet-Kampetenga G, Stankovski D, Toffano C, Tognolli M, Caboche M and Lecharny A. (2005) GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts. Nucleic Acids Research 33, D641-6. PUBMED Impact Factor: 8

Previous Publications by Ian Small

1. Mireau, H., Cosset, A., Marechal-Drouard, L., Fox, T.D., Small, I.D. and Dietrich, A. (2000) Expression of Arabidopsis thaliana mitochondrial alanyl-tRNA synthetase is not sufficient to trigger mitochondrial import of tRNAAla in yeast. J Biol Chem, 275, 13291-13296. (PubMed)

2. Peeters, N.M., Chapron, A., Giritch, A., Grandjean, O., Lancelin, D., Lhomme, T., Vivrel, A. and Small, I. (2000) Duplication and quadruplication of Arabidopsis thaliana cysteinyl- and asparaginyl-tRNA synthetase genes of organellar origin. J Mol Evol, 50, 413-423. (PubMed)

3. Small, I.D. and Peeters, N. (2000) The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci, 25, 46-47. (PubMed)

4. Yukawa, Y., Sugita, M., Choisne, N., Small, I. and Sugiura, M. (2000) The TATA motif, the CAA motif and the poly(T) transcription termination motif are all important for transcription re-initiation on plant tRNA genes. Plant J, 22, 439-447. (PubMed)

5. Small, I. and Kron, K.A. (2001) Placing heathers on the "Tree of Life". Yb. Heather Soc., 2001, 15-21.

6. Peeters, N. and Small, I. (2001) Dual targeting to mitochondria and chloroplasts. Biochim Biophys Acta, 1541, 54-63. (PubMed)

7. Duchene, A.M., Peeters, N., Dietrich, A., Cosset, A., Small, I.D. and Wintz, H. (2001) Overlapping destinations for two dual-targeted glycyl-tRNA synthetases in Arabidopsis thaliana and Phaseolus vulgaris. J Biol Chem, 276:15275-15283. (PubMed)

8. Fey, J., Weil, J.H., Tomita, K., Cosset, A., Dietrich, A., Small, I. and Marechal-Drouard, L. (2001) Editing of plant mitochondrial transfer RNAs. Acta Biochim Pol, 48, 383-389. (PubMed)

9. Fey, J., Weil, J.H., Tomita, K., Cosset, A., Dietrich, A., Small, I. and Marechal-Drouard, L. (2002) Role of editing in plant mitochondrial transfer RNAs. Gene, 286, 21-24. (PubMed)

10. Mollier, P., Hoffmann, B., Debast, C. and Small, I. (2002) The gene encoding Arabidopsis thaliana mitochondrial ribosomal protein S13 is a recent duplication of the gene encoding plastid S13. Curr Genet, 40, 405-409. (PubMed)

11. Hilson, P., Small, I. and Kuiper, M.T. (2003) European consortia building integrated resources for Arabidopsis functional genomics. Curr Opin Plant Biol, 6, 426-429. (PubMed)

12. Ambard-Bretteville, F., Small, I., Grandjean, O. and Colas des Francs-Small, C. (2003) Discrete mutations in the presequence of potato formate dehydrogenase inhibit the in vivo targeting of GFP fusions into mitochondria. Biochem. Biophys. Res. Commun., 311, 966-971. (PubMed)

13. Desloire, S., Gherbi, H., Laloui, W., Marhadour, S., Clouet, V., Cattolico, L., Falentin, C., Giancola, S., Renard, M., Budar, F., Small, I., Caboche, M., Delourme, R. and Bendahmane, A. (2003) Identification of the fertility restoration locus, Rfo, in radish, as a member of the pentatricopeptide-repeat protein family. EMBO Rep, 4, 588-594 (PubMed)

14. Small I, Peeters N, Legeai F, Lurin C. (2004) Predotar: A tool for rapidly screening proteomes for N-terminal targeting sequences. Proteomics. 4:1581-90. (PubMed)

15. Claire Lurin, Charles Andres, Sebastien Aubourg, Mohammed Bellaoui, Frederique Bitton, Clemence Bruyere, Michel Caboche, Cedrig Debast, Jose Gualberto, Beate Hoffmann, Alain Lecharny, Monique Le Ret, Marie-Laure Martin-Magniette, Hakim Mireau, Nemo Peeters, Jean-Pierre Renou, Boris Szurek, Ludivine Taconnat, and Ian D. Small (2004) Genome-Wide Analysis of Arabidopsis Pentatricopeptide Repeat Proteins Reveals Their Essential Role in Organelle Biogenesis. Plant Cell 16: 2089-2103. (PubMed)

16. Duchene AM, Giritch A, Hoffmann B, Cognat V, Lancelin D, Peeters NM, Zaepfel M, Marechal-Drouard L, Small ID (2005) Dual targeting is the rule for organellar aminoacyl-tRNA synthetases in Arabidopsis thaliana. Proc Natl Acad Sci U S A. 102:16484-16489. (PubMed)

17. Aubourg S, Brunaud V, Bruyere C, Cock M, Cooke R, Cottet A, Couloux A, Dehais P, Deleage G, Duclert A, Echeverria M, Eschbach A, Falconet D, Filippi G, Gaspin C, Geourjon C, Grienenberger JM, Houlne G, Jamet E, Lechauve F, Leleu O, Leroy P, Mache R, Meyer C, Nedjari H, Negrutiu I, Orsini V, Peyretaillade E, Pommier C, Raes J, Risler JL, Riviere S, Rombauts S, Rouze P, Schneider M, Schwob P, Small I, Soumayet-Kampetenga G, Stankovski D, Toffano C, Tognolli M, Caboche M, Lecharny A. (2005) GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts. Nucleic Acids Res. 33 (Database issue): D641-6. (PubMed)

18. Andres C, Lurin C, Small ID (2006) The multifarious roles of PPR proteins in plant mitochondrial gene expression. Physiologia Plantarum (in press) Impact Factor: 2.1

19. Millar AH, Whelan J, Small I (2006) Recent surprises in protein targeting to mitochondria and plastids. Current Opinion in Plant Biology 9:610-5 (PubMed) Impact Factor: 10.8

last modified: Mon Jun 16 15:46:59 2008

Centre Publications for Ian Small

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