Arabidopsis Databases
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Arabidopsis Mitochondrial Protein Database (AMPDB)Uilizing data from the plant scientific community and from our own experimental work, this database allows relational searching through a web interface of mitochondrial proteomic data from Arabidopsis. The database also includes predictions of mitochondrial localistation, orthology mapping to other mitochondrial proteome sets from yeast, humans and the mitoichondrial progenitoir, Rickettsia. |
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Arabidopsis SubCellular Proteomic Database (SUBA)The SubCellular Proteomic Database (SUBA) houses large scale proteomic and GFP localisation sets from cellular compartments of Arabidopsis. It also contains precompiled bioinformatic predictions for protein subcellular localisations. The current version is SUBA2 although SUBA1 is still available |
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Mitochondrial Protein Import Components (MPRIC)The MPRIC database is the successor to MPIMP and covers a wider range of species and proteins |
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Mitochondrial Protein Import Machinery of Plants (MPIMP)Flash 6 enabled interactive diagram of the plant mitochondrial protein import process, with links leading to various sequence information, protein analysis and references. Information about Arabidopsis mitochondrial protein import components in table format. Detailed information can be accessed through links in the table. Contains the same data as the interactive diagram. |
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Arabidopsis GST Protein Family (AtGST)This dataset outlines the 53 members of the Glutathione S-transferase (GST) family in Arabidopsis. The list is divided into their pre-defined subfamilies and also shows their levels of duplication throughout the genome. |
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Anno-JAnno-J is a genome annotation visualization application built using Web 2.0 technology (REST, AJAX and DHTML). It has been designed specifically with next-gen sequencing data in mind and can easily handle large amounts of short-read information. It is designed to run without installation in any modern W3C compliant browser, (Firefox, Safari, Mozilla, Camino or Opera), and allows flexible configuration of multiple tracks from data providers located anywhere on the internet. The program is currently in advanced Alpha-stage development and is expected to go Beta in early March 2008. |









